https://abdulaziz-albeshri.r-universe.devRecent package updates in abdulaziz-albeshriR-universehttps://github.com/abdulaziz-albeshri.pnghttps://abdulaziz-albeshri.r-universe.devTue, 28 Apr 2026 13:06:49 GMTa.z.a1410@hotmail.com (Abdulaziz Albeshri)Tools to harmonize bulk RNA-seq matrices, optionally apply batch correction, and train cross-validated classification models using ranger, glmnet, or xgboost. Supports leakage-safe feature selection, permutation importance, SHAP-based interpretability, and calibration methods (Platt or isotonic). Provides stability metrics across folds, embeddings (PCA/UMAP), ROC visualization, SHAP dependence plots, and tidy ranked-gene tables for downstream analysis.https://github.com/r-universe/bioc/actions/runs/39024852680Tue, 28 Apr 2026 13:06:49 GMTRFGeneRank1.1.0successhttps://bioc.r-universe.devhttps://github.com/bioc/RFGeneRankRFGeneRank.RmdRFGeneRank.htmlRFGeneRank: Cross-validated, stable predictive gene ranking for transcriptomics2025-12-28 02:53:392026-03-30 21:02:27